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Phenylalanine–tRNA ligase

In enzymology, a phenylalanine–tRNA ligase () is an enzyme that catalyzes the chemical reaction

ATP + -phenylalanine + tRNA AMP + diphosphate + -phenylalanyl-tRNA

The 3 substrates of this enzyme are ATP, -phenylalanine, and tRNA, whereas its 3 products are AMP, diphosphate, and -phenylalanyl-tRNA.

This enzyme belongs to the family of ligases, to be specific those forming carbon–oxygen bonds in aminoacyl-tRNA and related compounds. The systematic name of this enzyme class is -phenylalanine:tRNA ligase (AMP-forming). Other names in common use include phenylalanyl-tRNA synthetase, phenylalanyl-transfer ribonucleate synthetase, phenylalanine-tRNA synthetase, phenylalanyl-transfer RNA synthetase, phenylalanyl-tRNA ligase, phenylalanyl-transfer RNA ligase, -phenylalanyl-tRNA synthetase, and phenylalanine translase. This enzyme participates in phenylalanine, tyrosine and tryptophan biosynthesis and aminoacyl-tRNA biosynthesis.

Phenylalanine-tRNA synthetase (PheRS) is known to be among the most complex enzymes of the aaRS (aminoacyl-tRNA synthetase) family. Bacterial and mitochondrial PheRSs share a ferredoxin-fold anticodon binding (FDX-ACB) domain, which represents a canonical double split alpha+beta motif having no insertions. The FDX-ACB domain displays a typical RNA recognition fold (RRM) formed by the four-stranded antiparallel beta sheet, with two helices packed against it.

Structural studies

As of late 2007, 10 structures have been solved for this class of enzymes, with PDB accession codes , , , , , , , , , and .

References

Further reading