This list of structural comparison and alignment software is a compilation of software tools and web portals used in pairwise or multiple structural comparison and structural alignment.
Structural comparison and alignment
Key map:
* Cñ -- Backbone Atom (Cñ) Alignment;
* AllA -- All Atoms Alignment;
* SSE -- Secondary Structure Elements Alignment;
* Seq -- Sequence-based alignment
* Pair -- Pairwise Alignment (2 structures *only*);
* Multi -- Multiple Structure Alignment (MStA);
* C-Map -- Contact Map
* Surf -- Connolly Molecular Surface Alignment
* SASA -- Solvent Accessible Surface Area
* Dihed -- Dihedral Backbone Angles
* PB -- Protein Blocks
* No -- Only rigid-body transformations are considered between the structures being compared.
* Yes -- The method allows for some flexibility within the structures being compared, such as movements around hinge regions.
References