Manipal University may refer to:
- Manipal Academy of Higher Education, formerly known as Manipal University, Manipal, Karnataka, India
- Manipal Academy of Higher Education, Dubai, formerly known as Manipal University Dubai
- Manipal University Jaipur, Rajasthan, India
- Manipal International University, Negeri Sembilan, Malaysia
- Sikkim Manipal University, Gangtok, Sikkim, India