Makee Township is one of eighteen townships in Allamakee County, Iowa, USA. At the 2010 census, its population was 4,176.
Makee Township was organized in 1852.
Makee Township covers an area of and contains one incorporated settlement, Waukon, which is the Allamakee County seat. According to the USGS, it contains five cemeteries: County Care Facility, Lycurgus, Makee Township, Oakland and Round Prairie.