Bandar-e Emam Khomeyni Rural District () is in Bandar-e Emam Khomeyni District of Bandar Mahshahr County, Khuzestan province, Iran. It is administered from the city of Bandar-e Emam Khomeyni.
At the time of the 2006 National Census, the rural district's population was 922 in 197 households. There were 1,034 inhabitants in 231 households at the following census of 2011. The 2016 census measured the population of the rural district as 732 in 200 households. The most populous of its 50 villages was Shahrak-e Vali-ye Asr, with 728 people.