The 2018 CAF Confederation Cup knockout stage was played from 16 September to 2 December 2018. A total of eight teams competed in the knockout stage to decide the champions of the 2018 CAF Confederation Cup.
The winners and runners-up of each of the four groups in the group stage advanced to the quarter-finals.
<section begin=Format /> In the knockout stage, the eight teams played a single-elimination tournament. Each tie was played on a home-and-away two-legged basis. If the aggregate score was tied after the second leg, the away goals rule would be applied, and if still tied, extra time would not be played, and the penalty shoot-out would be used to determine the winner (Regulations III. 26 & 27).<section end=Format />
The schedule of each round was as follows (matches scheduled in midweek in italics). Effective from the Confederation Cup group stage, weekend matches were played on Sundays while midweek matches were played on Wednesdays, with some exceptions. Kick-off times were also fixed at 13:00, 16:00 and 19:00 GMT.
The bracket of the knockout stage was determined as follows:
<section begin=Bracket /> The bracket was decided after the draw for the knockout stage (quarter-finals and semi-finals), which was held on 3 September 2018, 19:00 EET (), at the CAF headquarters in Cairo, Egypt.
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<section begin=Quarter-finals /> In the quarter-finals, the winners of one group played the runners-up of another group (teams from same group could not play each other), with the group winners hosting the second leg, and the matchups decided by draw.
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Enyimba won 5âÂÂ1 on aggregate.
Raja Casablanca won 3âÂÂ1 on aggregate.
Al-Masry won 2âÂÂ0 on aggregate.
AS Vita Club won 4âÂÂ2 on aggregate.
<section begin=Semi-finals /> In the semi-finals, the four quarter-final winners played in two ties, with the matchups and order of legs decided by draw.
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Raja Casablanca won 3âÂÂ1 on aggregate.
AS Vita Club won 4âÂÂ0 on aggregate.
<section begin=Final /> In the final, the two semi-final winners played each other, with the order of legs determined by the semi-final draw.
Raja Casablanca won 4âÂÂ3 on aggregate.<section end=Final />